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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA06G0131200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 294aa MW: 30902.2 Da PI: 5.4958 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA06G0131200.1 | genome | AGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 24.7 | 4.2e-08 | 199 | 245 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ + + + RR+ri +++ L+el+P+ +K++ +++L +A+ Y+k +q
ORGLA06G0131200.1 199 TQSSAAKSRRERISERLRALQELVPSG-----GKVDMVTMLDRAISYVKFMQ 245
56677899*****************98.....8****************998 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MAMVAGDEAM SMPWHDVGVV VDPEAAGTAP FDAGAGYVPS YGQCQYYYYY DDHHHHPCST 60 ELIHAGDAGS AVAVAYDGVD GWVHAAAAAT SPSSSSALTF DGHGAEEHSA VSWMDMDMDA 120 HGAAPPLIGY GPTAATSSPS SCFSSGGSGD SGMVMVTTTT PRSAAASGSQ KRARPPPSPL 180 QGSELHEYSK KQRANNKETQ SSAAKSRRER ISERLRALQE LVPSGGKVDM VTMLDRAISY 240 VKFMQMQLRV LETDAFWPAS DGATPDISRV KDALDAIILS SSSPSQKASP PRSG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CT836278 | 0.0 | CT836278.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA023K08, full insert sequence. |