 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA05G0158600.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
C2H2 |
| Protein Properties |
Length: 389aa MW: 42140.9 Da PI: 6.1904 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA05G0158600.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.2 | 0.00028 | 212 | 228 | 1 | 17 |
EEETTTTEEESSHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLk 17
++C+ C+k F+r n++
ORGLA05G0158600.1 212 FVCHVCNKAFNRYNNMQ 228
89*********988875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MVLRACTMVE GSSFVVGGGG GVPFFEWLKP RSSPPPSPSS SSTTTTSSSL TAQRQPRGAG 60
TMLCLPLLGR LGEEPVDADD GGAMNNPPVK EEVSNTTDDY AGVDLNIGLP ATTGGCSSED 120
APMDEDEEDD DDDDEEEETE DDEEKAAGLE GCKVEEEERE QVHSEGSKYY VSVGGGEDQS 180
SNAGDVDAGA ACRGRRYWIP TPAQILIGPV QFVCHVCNKA FNRYNNMQQM HMWGHGREYR 240
KGPESLKGTQ ATATLAMLKL PCYCCAAGCR NNVGHPRARP LKDFRTLQTH YKRKHGAKPF 300
ACRRCAKPFA VKGDWRTHEK NCGKRWFCAC GSDFKHKRSL NDHVRSFGGG HFPVAAAAAH 360
AAAAPPKQQQ RIIRFDDAMA PTHGGGLMN
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK102658 | 0.0 | AK102658.1 Oryza sativa Japonica Group cDNA clone:J033101H19, full insert sequence. |
