 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA05G0141400.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 331aa MW: 32591.2 Da PI: 7.0726 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA05G0141400.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 96.5 | 2e-30 | 110 | 163 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
ORGLA05G0141400.1 110 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 163
59*******************.********************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MREEEEPSWF ARWEEQLPAP DELMPLSQSL ITPDLAVAFD IPTHGGGGGG GVGGGVVGGD 60
GVGGGGGGGG GGGGGVGAGE MNGGASSAAG SSGGGGGGGG GDEPARTLKR PRLVWTPQLH 120
KRFVDAVAHL GIKNAVPKTI MQLMSVDGLT RENVASHLQK YRLYLKRMQG VGNGGGGGGG 180
GSAGAGGSHS SGSGTDAATE HLFATGPVPF LPPGRAPAGG DPYPPFAPMG GHHHHPPQIG 240
HFHHHPAARP LGHYGSGPGA GFDHGFLSRA VAGGGPPVGP PGMHHRMVGP AAGMAMMAPS 300
PFAEELELGS RGGGGGGGRR ELTLFPTTGD H
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 310 | 318 | RGGGGGGGR |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway. {ECO:0000269|PubMed:20331973}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold. {ECO:0000269|PubMed:20331973}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC130607 | 0.0 | AC130607.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0017D10, complete sequence. |
| GenBank | AC130729 | 0.0 | AC130729.3 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0668F02, complete sequence. |
| GenBank | AP014961 | 0.0 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
