PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORGLA05G0020400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | EIL | ||||||||
Protein Properties | Length: 81aa MW: 8626.08 Da PI: 10.286 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 103.5 | 4.2e-32 | 1 | 58 | 60 | 113 |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....X CS EIN3 60 MlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaisky....q 113 Mlk+mevcnaqGfvYgiipekgkpv++asd+Lr+WWkekv+fdrn paai+k q ORGLA05G0020400.1 1 MLKMMEVCNAQGFVYGIIPEKGKPVSSASDNLRSWWKEKVRFDRNSPAAIAKAalpaQ 58 9***************************************************965432 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.6E-33 | 1 | 55 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence Send to blast |
MLKMMEVCNA QGFVYGIIPE KGKPVSSASD NLRSWWKEKV RFDRNSPAAI AKAALPAQAA 60 VHLVALGAHA ALRPAEAPLS A |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | ORGLA05G0020400.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012613 | 2e-81 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001234546.1 | 1e-27 | protein EIN3-like3 | ||||
Refseq | XP_006347695.1 | 1e-27 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_015062250.1 | 1e-27 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_016538319.1 | 1e-27 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_025878601.1 | 1e-29 | LOW QUALITY PROTEIN: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q8W3L9 | 1e-28 | EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2 | ||||
TrEMBL | I1PS56 | 2e-51 | I1PS56_ORYGL; Uncharacterized protein | ||||
STRING | ORGLA05G0020400.1 | 4e-52 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 2e-25 | ETHYLENE-INSENSITIVE3-like 1 |
Publications ? help Back to Top | |||
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