 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
ORGLA05G0011100.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 92aa MW: 10466.2 Da PI: 8.5098 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA05G0011100.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 22.4 | 2.8e-07 | 56 | 87 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32
+g+WT++Ed +lv v+++G ++W+ a+ g
ORGLA05G0011100.1 56 KGPWTEQEDVQLVWFVRLFGERRWDFLAKVSG 87
79***********************9999887 PP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC093921 | 1e-148 | AC093921.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBb0041A22, complete sequence. |
| GenBank | AC108504 | 1e-148 | AC108504.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1654_B10, complete sequence. |
| GenBank | AK099223 | 1e-148 | AK099223.1 Oryza sativa Japonica Group cDNA clone:J013091O17, full insert sequence. |
| GenBank | AK111634 | 1e-148 | AK111634.1 Oryza sativa Japonica Group cDNA clone:J013119H17, full insert sequence. |
| GenBank | AP014961 | 1e-148 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012613 | 1e-148 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
| GenBank | CT829536 | 1e-148 | CT829536.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107P09, full insert sequence. |
