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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA04G0278200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 216aa MW: 24239.7 Da PI: 9.7424 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA04G0278200.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 69.9 | 6.6e-22 | 21 | 112 | 1 | 94 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya.tgkrknratk.sgyWkatgkdk 90
lp GfrF+Ptdeel+ +yL++kv +++l++ +vi+ +d+ +++PwdLp +++ e yfF+ +++ +g +ra g W+a+gk+k
ORGLA04G0278200.1 21 LPIGFRFRPTDEELLLHYLRRKVMSRPLPA-DVIPVADLAHLHPWDLP---GEGDGERYFFHLPATSCWrRGGGGSRAGGgGGAWRASGKEK 108
699***************************.99***************...346778999998887776258888886443899*******9 PP
NAM 91 evls 94
v++
ORGLA04G0278200.1 109 LVVA 112
9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MAAEAASGGG GGYRMLPQAG LPIGFRFRPT DEELLLHYLR RKVMSRPLPA DVIPVADLAH 60 LHPWDLPGEG DGERYFFHLP ATSCWRRGGG GSRAGGGGGA WRASGKEKLV VAPRCGXXXX 120 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 180 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXX
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK067450 | 0.0 | AK067450.1 Oryza sativa Japonica Group cDNA clone:J013106M04, full insert sequence. |
GenBank | AK068446 | 0.0 | AK068446.1 Oryza sativa Japonica Group cDNA clone:J013153H06, full insert sequence. |
GenBank | AK288942 | 0.0 | AK288942.1 Oryza sativa Japonica Group cDNA, clone: J090083D07, full insert sequence. |
GenBank | CT829591 | 0.0 | CT829591.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA017E23, full insert sequence. |
GenBank | CT829592 | 0.0 | CT829592.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111B01, full insert sequence. |
GenBank | CU406744 | 0.0 | CU406744.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C109J05, full insert sequence. |
GenBank | GU120351 | 0.0 | GU120351.1 Oryza sativa Japonica Group clone KCG153D01 NAC4 protein mRNA, complete cds. |