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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
ORGLA04G0252700.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
ERF |
| Protein Properties |
Length: 190aa MW: 20047.3 Da PI: 8.3427 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA04G0252700.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 38 | 4e-12 | 26 | 63 | 15 | 55 |
AP2 15 WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++AeIrdp + r+r++lg++++ae Aa+a++ a+++l+g
ORGLA04G0252700.1 26 FAAEIRDPAK---RARVWLGTYDSAEAAARAYDVAARNLRG 63
68*****843...6*************************99 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
XXXXXXXXXX XXXXXXXXXX XXXXXFAAEI RDPAKRARVW LGTYDSAEAA ARAYDVAARN 60
LRGPLARTNF PLVSSLPLPS PHYHLPGKAA AAAPPVAGPA CSASSTVESS SGPRGPRPAA 120
TAAAVPRRRV PRPAPPAPDA GCHSDCASSA SVVDDADDAS TVRSRVAAFD LNLPPPLDRD 180
HVDLCTDLRL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ650506 | 0.0 | KJ650506.1 Oryza glaberrima clone OG_BBa0063K01, complete sequence. |
