 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA04G0177300.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
ERF |
| Protein Properties |
Length: 330aa MW: 34863.8 Da PI: 5.9561 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA04G0177300.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 63.1 | 5.8e-20 | 140 | 190 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ eAa+a+++a+ +++g
ORGLA04G0177300.1 140 KYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRG 190
8********.**********96554..*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MDFHHGDADD FALEFIREHL LGVDGATAMA TEPAGLEVVE PAAAYPPMFL PRHDQQEQHG 60
CHVELTHEHV ESAPAAEAAA AAFRAAPAQP AAEVMIKFGG EASPVRPSSS LTVTVPPSSF 120
GSWASAAAPA AAAVVDDFRK YRGVRQRPWG KFAAEIRDPK RRGSRVWLGT YDTPVEAARA 180
YDRAAFRMRG TKAILNFPNE VGTRGAELWA PPPPPPAHSA AASTTNKRKR QPSEDPDDGV 240
EVIGVVSKAV KTEAPTSNSS SLSSSLTSRD TTPATSSAGA EHAGAAAESS PATPSSWSWE 300
QYWEALLGGL PPLSPLSPHP ALGFPQLTVN
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK109141 | 0.0 | AK109141.1 Oryza sativa Japonica Group cDNA clone:002-155-E09, full insert sequence. |
| GenBank | AL607006 | 0.0 | AL607006.4 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence. |
| GenBank | AL731613 | 0.0 | AL731613.5 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence. |
| GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
| GenBank | AY339379 | 0.0 | AY339379.1 Oryza sativa (japonica cultivar-group) Ap26 mRNA, complete cds. |
