 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
ORGLA04G0129600.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 282aa MW: 31023.4 Da PI: 4.0391 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA04G0129600.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 41.5 | 4.1e-13 | 13 | 155 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknratksgyWk 84
lp G+rF+P+d +++ +yL + + + + +v++ vd++ + P +p +v ++++ + yfF + + + + r + g W
ORGLA04G0129600.1 13 LPWGYRFRPSDRQIIANYLGPMAIHGAdslPQRGDVVEGVDVFATRPAAIPFeprrHVFGRDEvRAYFFGDQPTD----S-RGREVPGGAWL 99
689****************99976665475455578**************9546653333344377999887554....3.4577899**** PP
NAM 85 atgkdkevlsk...kgelvglkktLvfy.........kgrapkgektdWvmheyrl 128
g + +s +ge+v ++ f ++a ++ + +W m+eyrl
ORGLA04G0129600.1 100 PCGGGDKAYSGgadGGEAVAYRRKYEFRaaneeadraGEEAATPARPRWRMKEYRL 155
999988888877778888*********97776665532467777899*******98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MASSAHMAAV LNLPWGYRFR PSDRQIIANY LGPMAIHGAD SLPQRGDVVE GVDVFATRPA 60
AIPFEPRRHV FGRDEVRAYF FGDQPTDSRG REVPGGAWLP CGGGDKAYSG GADGGEAVAY 120
RRKYEFRAAN EEADRAGEEA ATPARPRWRM KEYRLNKSAA AFRRAYAQPN PKANMDCVVR 180
EIYTKAVPPP TPPSGRSGDE EMQEGSDYSV MDEDELVDYL LQGFEDGNFD EDQDQPAAAE 240
DGDYSDEDED QPAAAEDGDY SDEDQDQPAA AEDGDYSDED EP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL731582 | 0.0 | AL731582.2 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence. |
| GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. |
