 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA04G0098400.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 354aa MW: 37315.9 Da PI: 4.3487 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA04G0098400.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14.1 | 8.9e-05 | 136 | 153 | 38 | 55 |
STCHHHHHHHHHHHHHHH CS
HLH 38 lsKaeiLekAveYIksLq 55
+Ka+i+e +++YIk+Lq
ORGLA04G0098400.1 136 TDKATIVEATINYIKNLQ 153
89***************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MSQEGPNNHP QGTQETHDCP FTIATNTPLG STKMGYSDSR KSDENNTSSK PASPVVSSDV 60
VEIKETWENV VVADEEGEGG EDGFASDASE SKSKSSSDEV DYELLDLLAG AREGCSGGNN 120
NDEVKNFAYA DHKMHTDKAT IVEATINYIK NLQDKIHKME MLKVEREHAI ALAAAATAAT 180
ATATAAASAD TALQAPPPPS EEENEEEHDS VVAAATREMA LADMVHAWEQ QQEAAATGGS 240
HGGHAVPPPP PPAASLQTWT GPNMTASLTG DDGFITLSLP HQGGQKNLVA GAVSVLERHH 300
IDVVTATVSA SEQGDNLISL HCHLSPGSSS SQNLTPLDKF KLAMSELMLW VISV
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK107268 | 0.0 | AK107268.1 Oryza sativa Japonica Group cDNA clone:002-125-H08, full insert sequence. |
