 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
ORGLA04G0072000.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 465aa MW: 51372.4 Da PI: 4.5358 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA04G0072000.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 31.8 | 2.5e-10 | 136 | 180 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
Er+RR r+++++ eLr l+P+ +K++Ka+i Av Y+k+Lq
ORGLA04G0072000.1 136 IVSERKRRVRMKEKLYELRALVPNI-----TKMDKASIIADAVVYVKDLQ 180
568*********************7.....7******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0034756 | Biological Process | regulation of iron ion transport |
| GO:0071281 | Biological Process | cellular response to iron ion |
| GO:0071369 | Biological Process | cellular response to ethylene stimulus |
| GO:0071732 | Biological Process | cellular response to nitric oxide |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 465 aa
Download sequence Send
to blast |
MEHHHLLLQL SPPPPPPPLP AVHLMMSPSF FDAGVFADVG GDWMEDLMHL GELFGVGVGG 60
DDDDNGGVDG RVGGGDDRMQ EWQNNCEGGG SPDHQPSCGD GDGDGDGDVS PRDGELGDGD 120
GDNSATRKRR DRSKTIVSER KRRVRMKEKL YELRALVPNI TKMDKASIIA DAVVYVKDLQ 180
AHARKLKEEV AALEEARPIR PPPPSAAAXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XFFVTVECEP AAAAARGGGG GVAAPVCAAV ESLSCFTVES STVGCSPDRV 420
VATLTLKVSE AEEDVSAISE CTVKLWVMAA LLKEGFRPQP TVQIS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 127 | 142 | KRRDRSKTIVSERKRR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CT835040 | 0.0 | CT835040.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119K17, full insert sequence. |
