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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA04G0006000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
E2F/DP |
Protein Properties |
Length: 493aa MW: 53632.1 Da PI: 4.7385 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA04G0006000.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 82.6 | 3.2e-26 | 193 | 258 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r+++sL+llt+kf++lle +e+g+++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn irwkg
ORGLA04G0006000.1 193 RYDSSLGLLTKKFINLLEGAEDGTLDLNKAAETL---EV--QKRRIYDITNVLEGVDLIEKTLKNMIRWKG 258
6899******************************...99..****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000902 | Biological Process | cell morphogenesis |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042023 | Biological Process | DNA endoreduplication |
GO:0051782 | Biological Process | negative regulation of cell division |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0005730 | Cellular Component | nucleolus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 493 aa
Download sequence Send
to blast |
MDGSAAIPPA PAPTPPAPAP XXXXXFLRRS VLPPPPAPHR APPPPGAHVH YFRAASPIPI 60 FRAAASSRPP RPPPPSTTAA AAPPPAAPAV TPARPPPQQP AVAVAPPPAT TTATATEEVA 120 APATGNPMAN AADNEEKNER ETVQSEVAKG ETVQGPDKES TTGTVKGIKR PRKPKGFKKG 180 DAGPSLFSPS NCRYDSSLGL LTKKFINLLE GAEDGTLDLN KAAETLEVQK RRIYDITNVL 240 EGVDLIEKTL KNMIRWKGFD MSKPKERERQ ISALKLLELN LITMTVMVPL YVSSKETMEE 300 IESLYDEESR LDDEIMEAQE KLNALRVDED RRKLYVSKED INAIPRFQGS TLIAVNAPRG 360 TYIEVPDPNL DMDIYKDLDN QEKHYQIVFR SAMGPVDCFL ISNHQETFNT DQQMADNLDA 420 AVTSGSSQAP QQMDYVQASE IGESNGVREH TSEPSKRDDP VPGIVKIVPS DDIAADYWLS 480 SDADVSMTDT WGT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CR854994 | 1e-171 | CR854994.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0127D24, complete sequence. |