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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA03G0090000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
FAR1 |
Protein Properties |
Length: 430aa MW: 49627 Da PI: 7.713 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA03G0090000.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 71.3 | 2.2e-22 | 88 | 179 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
+fYn+YA+e+GFs+r+s+ ++ +++ i++rtf+Cs+eg+r +k++ ++ +r+etr++C+a++k++ dg ++v++++ eH+H l
ORGLA03G0090000.1 88 EFYNAYASEIGFSIRRSSYHYMGNTKIIKNRTFCCSREGTRGVDKRRealVYGNSFNRPETRCKCQACIKISFI-DGFYQVYHFVPEHSHIL 178
6****************************************999888666677888******************.***************99 PP
FAR1 90 a 90
a
ORGLA03G0090000.1 179 A 179
7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MPNNSMIPPS EASQLHDAGA SPMFLDNTFA ATTSFTNLVE PDDSSAGLGM KQIETDQGAN 60 EDSHTRKASE KMTPKVGMKF NSEQEAYEFY NAYASEIGFS IRRSSYHYMG NTKIIKNRTF 120 CCSREGTRGV DKRREALVYG NSFNRPETRC KCQACIKISF IDGFYQVYHF VPEHSHILAT 180 KSQAHQLRSQ RKVNEAQVAS VEVAKSVGIS TKAAVDMLAK QSCGYENLGF TRVDMKNKLY 240 SKRSLLTKQE EEEEFIKAWH QLHDKYELQQ NKWLQRIFDK RHQWALVYGR NTFSADMSTT 300 QRNESFKNEL KGYISVKYDM LTFFEHFDRL LGDKRYEEVK CDFRATQSTP RPKAELRILR 360 DVVEVYTPAI YKIFEEEVMQ TLNCDIFYCG DVDEQKVHKI KSHEDIEKCL KIRCNPDLET 420 SSSPQGVKEN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004381 | 0.0 | AP004381.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0025F03. |
GenBank | AP014964 | 0.0 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |