 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
ORGLA03G0015000.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
bHLH |
Protein Properties |
Length: 291aa MW: 30732.1 Da PI: 9.9644 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA03G0015000.1 | genome | AGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 44.9 | 2.1e-14 | 115 | 166 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+ +N+ ++ Lr+l+P++ + ++ + a+++ A++Y+k+L+
ORGLA03G0015000.1 115 QRMTHIAVERNRRRLMNDHLASLRSLIPSN---YIPRGDQATVVGGAIDYVKQLE 166
79****************************...9*******************96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MEQWAAAAAA DQAAASAGAG QMPFLALLQG AMEADGGGGG DGRKRHAAAA AFASCCPCPP 60 VADLDLLESC VTQAAAPPVT APATRAERRR KRPRPRPRAA PPPEKRKKPE EAENQRMTHI 120 AVERNRRRLM NDHLASLRSL IPSNYIPRGD QATVVGGAID YVKQLEQQLV ALQAAAAERS 180 GVGVVATAAT AASDGVFVSP QYTSYSEARG GSGVDVEATA AVGGHVRVRV AGRRWTGRLV 240 RAVAAMEDLR LTVLHLAVTS VGHDAVVYCF NLKVKTTTTL HHLLLHVPSF F
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 87 | 97 | RRRKRPRPRPR |
2 | 89 | 95 | RKRPRPR |
3 | 89 | 107 | RKRPRPRPRAAPPPEKRKK |
4 | 90 | 94 | KRPRP |
5 | 115 | 126 | RMTHIAVERNRR |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC210491 | 0.0 | AC210491.1 Oryza glaberrima clone OG_BBa0088K23, complete sequence. |