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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA02G0311000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 440aa MW: 44442.3 Da PI: 6.1835 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA02G0311000.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37 | 6e-12 | 222 | 267 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq
ORGLA02G0311000.1 222 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 267
99***********************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 440 aa
Download sequence Send
to blast |
MQPNARQMHG GGGGGGGQDD FFDQMLSTLP AVWSELGSGK PAWDLTAGAV GGGGGASDDH 60 SAAAFDDSAL LASRLRQHQI DGGGDKPIML QLSDLHRHHG LAAGDDSGGA AGFLPLSLFA 120 DRSQDDIDAA FKSPNGARGD HALYNGFGAA GMHGAAAMQP PPFGQVRSMP AQSFGGGAAA 180 SGGGGGGSAS AAAAAGASSG GGAAAPPRQR QRARRGQATD PHSIAERLRR ERIAERMKAL 240 QELVPNANKT DKASMLDEII DYVKFLQLQV KVLSMSRLGG ASAVAPLVAN MSSESNGNGN 300 ATSSSGNGEA ANGSSNGDNN RGGTLRVTEQ QVAKLMEEDM GSAMQYLQGK GLCLMPISLA 360 TAISSATSSS LLPRTGGGAG GSLHEGGNGT SPPLVNGAAT GCDDSGVFFS VKFVVELSFL 420 LLNEDCRGKE ESKLLVQKGP
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold, UV, ethylene (ACC), flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003975 | 0.0 | AP003975.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1004_E04. |
GenBank | AP004094 | 0.0 | AP004094.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1695_H09. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |