 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA02G0219000.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 231aa MW: 24334.2 Da PI: 4.1766 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA02G0219000.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 31.2 | 5.1e-10 | 1 | 24 | 24 | 48 |
HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
W++Iar+++ gRt++++k++w++yl
ORGLA02G0219000.1 1 WSRIARHLP-GRTDNEVKNYWNSYL 24
*********.*************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
WSRIARHLPG RTDNEVKNYW NSYLKKRVES GGGKTSQGPP TTPASAASSP ADSDDSHSLQ 60
QKPHEPANSD SSEPAHESSS ASADSSCLTV TTDHPPVSRP HAAVTPKVMF ADWLDMEYIC 120
GQVAAAPGLD TAGFAVIGGA AGDQQQQQQQ QVMSQDGSVH QADGPSCGVD DSSLQQQQQE 180
GFGGNGGCWD FQEQFDSIDQ MQASGGGGGG GFCDLLSMSD FDLWAELERT A
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012610 | 0.0 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
| GenBank | CT837840 | 0.0 | CT837840.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108D17, full insert sequence. |
