PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORGLA02G0186100.1
Organism
Oryza glaberrima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 504aa    MW: 54465.3 Da    PI: 4.8383
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORGLA02G0186100.1genomeAGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3373.33.9e-114813702291
                        XXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
               EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa....tgakksn.......ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgk 82 
                        +lkkrmwkdqmll++l++ +    + +       +ga +s+       +++ + rrk+m raQDg+L++Mlk+me+cna+GfvYg i+e g+
  ORGLA02G0186100.1  81 DLKKRMWKDQMLLMKLEGGRPGGGGGRGGGglaaAGAGTSSegqleeeTPEARCRRKAMLRAQDGVLRHMLKMMEACNARGFVYGVIDEAGE 172
                        9********************9998888766666555555567777779******************************************* PP

                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH-- CS
               EIN3  83 pvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWP 174
                        p++g+sdsLr+WWk++v+fdr+gp+a++       +++g+s +  ++    h+l+++qD+tlgS+Lsal+qhc+ppqr+fple+g++pPWWP
  ORGLA02G0186100.1 173 PMSGSSDSLRGWWKDNVSFDRAGPMALIGP-----AAAGDSPQ--AGGGGLHRLQDIQDSTLGSVLSALIQHCEPPQRSFPLERGLAPPWWP 257
                        ****************************99.....34555555..59********************************************* PP

                        -S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX CS
               EIN3 175 tGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss 265
                        tG+e wwg++g ++++qg+ppy+kphdlkkawkvs+L+avikhmsp+++++r+l++qsk+lq+kmsakes+++++v++qee++ ++++++  
  ORGLA02G0186100.1 258 TGEEPWWGTQGeTQAHQGAPPYRKPHDLKKAWKVSLLSAVIKHMSPRFDQMRKLVWQSKRLQQKMSAKESDTWSKVIRQEEALDRRLKTSL- 348
                        ************************************************************************************9999987. PP

                        XXXXXXXXXXXXXXXXXXXXXXXXXX CS
               EIN3 266 slrkqspkvtlsceqkedvegkkesk 291
                            + + + ++ ++++d++g ++  
  ORGLA02G0186100.1 349 ----HITPLDADGGEEDDSDGLEDVV 370
                        ....6678888888888888433333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.9E-11781338No hitNo description
Gene3DG3DSA:1.10.3180.103.9E-65216347IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.09E-57216340IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    Send to blast
MASRSPTNKQ ISSEDRVRGA RGKRHHHSSD EWSMEHAEEH EHGRGGGERD DAAEPEAEQP  60
ELEQEELSDS ESVAESIEIS DLKKRMWKDQ MLLMKLEGGR PGGGGGRGGG GLAAAGAGTS  120
SEGQLEEETP EARCRRKAML RAQDGVLRHM LKMMEACNAR GFVYGVIDEA GEPMSGSSDS  180
LRGWWKDNVS FDRAGPMALI GPAAAGDSPQ AGGGGLHRLQ DIQDSTLGSV LSALIQHCEP  240
PQRSFPLERG LAPPWWPTGE EPWWGTQGET QAHQGAPPYR KPHDLKKAWK VSLLSAVIKH  300
MSPRFDQMRK LVWQSKRLQQ KMSAKESDTW SKVIRQEEAL DRRLKTSLHI TPLDADGGEE  360
DDSDGLEDVV RGAAAQDKRK REYTRSGSGS SSGNSGGGKF PRGGSGGADH HQLAVMLPEL  420
AAAADQEGRS PINELMKLYY SCLQQEEGAA DGGEAGGEGC DVAAAALAVP PEVLAGVDEV  480
AQDVLFDLIG SYPEVDDVLH FMDE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-502173444130Protein ETHYLENE INSENSITIVE 3
4zds_B5e-502173444130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104110GGRGGGG
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapORGLA02G0186100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0051160.0AP005116.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0703B01.
GenBankAP0149580.0AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015625091.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9FJQ53e-92EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLI1P1K50.0I1P1K5_ORYGL; Uncharacterized protein
STRINGORGLA02G0186100.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.13e-78EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]