 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA02G0153200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
FAR1 |
| Protein Properties |
Length: 174aa MW: 20594.1 Da PI: 4.5802 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA02G0153200.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 22.6 | 3.4e-07 | 5 | 44 | 51 | 89 |
FAR1 51 errtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
e+++ a tr+gC akl++++++ +g+w v++++++H el
ORGLA02G0153200.1 5 EKEPWALTRCGCLAKLEIERNEeKGVWFVKEFDNQHMLEL 44
5677889**************99*************7665 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 174 aa
Download sequence Send
to blast |
EDRVEKEPWA LTRCGCLAKL EIERNEEKGV WFVKEFDNQH MLELANPDHD AFLGVHRVMS 60
DSKKAQAVEL HMSGLRPFQI MEVMENNHDE SEEVGFVMKD LYNFFTRYEM KNIKGRDAEN 120
VLKYLTRKQE EDPEFFFKYT TDEEGRLRNV FWADVESRLD YAAFGGVVIF DSTY
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP005630 | 0.0 | AP005630.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OSJNBb0021C10. |
| GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
