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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA02G0088400.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
BES1 |
Protein Properties |
Length: 375aa MW: 38783.2 Da PI: 9.567 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA02G0088400.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 172.4 | 2.3e-53 | 5 | 165 | 1 | 145 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr..........kgskpl.eeaea 81
gg+gr ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny lpk++DnneVlkALc+eAGw+ve+DGttyr ++ k+ ++++
ORGLA02G0088400.1 5 GGGGRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRkywsldrieaAHVKKGlVKEAI 96
689*******************************************************************5544444433233333222333 PP
DUF822 82 agssasaspesslqsslkssalaspvesysaspk.sssfpspssldsislasa....asllpvlsvlsl 145
+ + + p s+l +l s asp++sy++sp+ +ssfps+ s+++i+l +sl+p+l++ls+
ORGLA02G0088400.1 97 METKGCKPPASELADQLGRSPSASPCSSYQPSPRgTSSFPSSGSSSQITLGGGggegSSLIPWLKTLSS 165
33333345556666788889999********99746899***999999998768899999***999876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MMNGGGGGRV PTWRERENNR RRERRRRAIA AKIYAGLRAY GNYTLPKHCD NNEVLKALCN 60 EAGWTVEPDG TTYRKYWSLD RIEAAHVKKG LVKEAIMETK GCKPPASELA DQLGRSPSAS 120 PCSSYQPSPR GTSSFPSSGS SSQITLGGGG GEGSSLIPWL KTLSSAGVGI GGGSSSKFPA 180 HYSYFGGGSI SAPVTPPSGS PPRTPRLKTA AWEEYHHHHA GSVLPPWATV GASYAYAASS 240 SLPNSTPPSP RRKVAAAAAA GGGGNDAAAW LAGFQISSAG PSSPTYSLVA PPPNPFGAAA 300 AAAGSSSRVM SGACSPVAGG DVQMADAARR EFAFGGEGGK MTGLVKAWEG ERIHEECGSD 360 DLELTLGSSM TRGDR
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5zd4_A | 5e-20 | 9 | 75 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 5e-20 | 9 | 75 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 5e-20 | 9 | 75 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 5e-20 | 9 | 75 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004070 | 0.0 | AP004070.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, BAC clone:OJ1705_E12. |
GenBank | AP014958 | 0.0 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |