PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORGLA01G0286100.1
Organism
Oryza glaberrima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 344aa    MW: 36913.4 Da    PI: 9.8232
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORGLA01G0286100.1genomeAGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.73.4e-15269312548
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                        +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN +Lk +
  ORGLA01G0286100.1 269 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLKRQ 312
                        79*************************************99954 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-14264313No hitNo description
SMARTSM003385.0E-11265329IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.576267323IPR004827Basic-leucine zipper domain
PfamPF001701.0E-12269312IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-11269315No hitNo description
CDDcd147077.49E-25269320No hitNo description
PROSITE patternPS000360272287IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MASKAGGGGV ARRGGGRMRS LGRQGSMYSL TLDEVQSQLG EPLHSMNLDE LLRSVFPDGL  60
AIADGAGAGA GATTSSQQHQ PGSGLLRQGS ITMPPELSKK TVDEVWKGIQ AAPKRNAETG  120
GGGGGGRRRR ERQPTLGEVT LEDFLVKAGV VTQGSLKELS DVGNVDPVGR GVTATGTVDL  180
APGSHWIEQY KQQIASTDAH HHGQQGVQGA YFPNRLVPQP LNVGPGAILE PSYSDGQTSS  240
GMIGGMSDSQ TPGRKRGMSG DVADKLMERR QKRMIKNRES AARSRARKQA YTNELENKVS  300
RLEEENVRLK RQKESDYLEL DELICAVPVP EPKYQLRRTS SADF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125132GRRRRERQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapORGLA01G0286100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126090.0CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015627754.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1NSM10.0I1NSM1_ORYGL; Uncharacterized protein
STRINGORGLA01G0286100.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-69ABA-responsive element binding protein 3