 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA01G0267200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 273aa MW: 29807.4 Da PI: 6.172 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA01G0267200.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 25.9 | 1.8e-08 | 131 | 191 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...............TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.as............kapskKlsKaeiLekAveYIksL 54
h +rEr RR+r+ ++++ L+ +lP+ as + K +i+ A +YI++L
ORGLA01G0267200.1 131 RHIMRERLRRERLSQGYADLQAILPTgASsskvlvkslirnYMS---GGKNTIVAAAANYIREL 191
599***********************997777777775444222...33556777888888777 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MENDDDVEHP FYYFVHDDAA AGVDDHEELL ASLGFLLPPP PPPPPPPQPD QGRSAFAAYQ 60
STAAMASSSS SSESLSRRYH SSASNVHRRM HRFLRSIYDD AGDDAGATAE MQPAEGEQQQ 120
AAPSGGSARF RHIMRERLRR ERLSQGYADL QAILPTGASS SKVLVKSLIR NYMSGGKNTI 180
VAAAANYIRE LEGRKGWLCA QNELLERTTP KPGAGMVVKV RAESELGSTV DVFEAVLRRL 240
KAMDELQVTA IQSWFGAGGM WMDVAVESKK LVS
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP003265 | 0.0 | AP003265.4 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0490D09. |
| GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
