 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
ORGLA01G0146100.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 175aa MW: 18162.8 Da PI: 8.3315 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA01G0146100.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 18.1 | 4.9e-06 | 34 | 75 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
Er RR+ + ++eL llP++ ++ s i+e+A+ ++ +L
ORGLA01G0146100.1 34 ERARRQTVSRLYAELGALLPNL----PPRASTTRIVEEAIACVGEL 75
9********************6....389**********9887665 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MAEEDNLALS VVCERSPGTA VEAASGRPPK AGSERARRQT VSRLYAELGA LLPNLPPRAS 60
TTRIVEEAIA CVGELRAKTA ELEAYSAVAA GRAARDGAAE VVASGKTSCF AVWLRAARAR 120
PGALTRVLEV FQRHGVAVLA ATVARDGEET AVTVTTAAVA PRVLETIKAE IICAA
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP004222 | 1e-178 | AP004222.3 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:B1003B09. |
| GenBank | AP014957 | 1e-178 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012609 | 1e-178 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
