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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA01G0108600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 207aa MW: 22302.2 Da PI: 7.1866 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA01G0108600.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.5 | 1.9e-19 | 49 | 99 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+G+r+++ +g+W+AeIrdp+ + r++lg++ tae Aa+a+++a+++++g+
ORGLA01G0108600.1 49 QYRGIRQRP-WGKWAAEIRDPV----KgVRVWLGTYPTAEAAARAYDRAARRIRGA 99
6********.**********75....44*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 207 aa
Download sequence Send
to blast |
MCGGAIIYDY IPARRRVCAS DFWPDADDSD PHTPAPEKPP RAKRERKNQY RGIRQRPWGK 60 WAAEIRDPVK GVRVWLGTYP TAEAAARAYD RAARRIRGAK AKVNFPNDFG AAPAPAAAAA 120 KAVPRIAPTP AVLPPPKMEA VSEGAGACSS DEVKELSEEL LAYENYMSFL GIPYMEGGAA 180 SAAGAEEAAA PAGLWTFEDY ELPSLAL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK111775 | 0.0 | AK111775.1 Oryza sativa Japonica Group cDNA clone:J023075G11, full insert sequence. |
GenBank | CT832402 | 0.0 | CT832402.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116K09, full insert sequence. |