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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA01G0085600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GeBP |
Protein Properties |
Length: 312aa MW: 33583.9 Da PI: 6.3777 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA01G0085600.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 82.3 | 7e-26 | 1 | 98 | 7 | 96 |
DUF573 7 wseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.....aksgkepsfskehdqkifels 92
w++e e+++L+G++df+a++g+ +++ d+ fy+ +++++sf+++ksqlveK+rrLKkK++ + ++ + ++f+++h+ i++l+
ORGLA01G0085600.1 1 WTDEEELLILRGFLDFTARRGTtfASHQyDTGPFYDEIRRRLSFDFTKSQLVEKLRRLKKKYRLCAARmasspHAAAAGFAFRTPHEGAIYDLA 94
*********************99877778***********************************99996666556677889************* PP
DUF573 93 kkiW 96
+ iW
ORGLA01G0085600.1 95 RHIW 98
**** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
WTDEEELLIL RGFLDFTARR GTTFASHQYD TGPFYDEIRR RLSFDFTKSQ LVEKLRRLKK 60 KYRLCAARMA SSPHAAAAGF AFRTPHEGAI YDLARHIWPP ALKRDGTASD DDDINPAAAA 120 TAAVTMPVAM EDGFGGSAPT PTPTPRGRGG RRVRRRMAQE QEAAALPSAP ALTSTDGAHQ 180 EPLVAAMENS FPQIAQLPPV SETAPMPVTA NGANEEAVRS VLSPLLKEFI TSFAVAGQTG 240 PGMGLNMGFG GAGLNADIAG LGFGIAGPNP GVPSADRWRQ QQILELEVYL KRIELVREQV 300 TAALDELRSS EG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 4e-13 | DNA-binding storekeeper protein-related transcriptional regulator |