 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA01G0003200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 388aa MW: 41816.1 Da PI: 8.6522 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA01G0003200.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 14.4 | 6.9e-05 | 275 | 313 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq
ORGLA01G0003200.1 275 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 313
7788899*********998.....8******************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MMASSSSSSS LCDTNHLFQD DLPWPSMPFA LAPNTFGLNH QWSQPPMLSS STDQLSSYEL 60
ESLQSVQSQL AAAPPTLSPH LQAHQLSTVL MMQELGFQWS SCAAPADQHS IASSMNNNNN 120
SNVMMNEEEL RPRPDQSLIS NPRSCSATTL LPPPHLHLDG AVLPSINVSR LQKPAAGDEP 180
PQICCKRQAA AAVVGHSSIR DEHVPCPYAG PPAHLIQGPS NTLQMKRNTN AAAQGRGGRH 240
GSSTEHRSST ALPPSSKKPR LESHSSSMLP SFKVRKEKLG DRIAALQQLV SPFGKTDTAS 300
VLMEAIGYIK FLQDQVETLS GPYLRSSKNS KKLACRAAQQ QRKGTSNGGD AAAKLDLRSR 360
GLCLVPLSCT SYVTNENGVW PPPNFRGN
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK119493 | 0.0 | AK119493.1 Oryza sativa Japonica Group cDNA clone:001-134-D09, full insert sequence. |
