 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC12G00970.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 277aa MW: 31391.4 Da PI: 6.3676 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC12G00970.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 58 | 1.9e-18 | 119 | 182 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnh 58
+Dg++WrKYGqK + ++++rsYYrC+ + gCp++k v++ ++ + k++++ Y g+H +
OPUNC12G00970.1 119 NDGHQWRKYGQKWISRAKHSRSYYRCANSkmqGCPATKTVQQMDSSGngtsKLFNVDYYGQHIC 182
8*************************9877789********99876522226899*******87 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MSLFRDRDCQ VVINMIEHQK ALMVELRGMV IPILPSDNEQ AKLALQLLGD ILSCSDKAIS 60
MLELGGDTNK LTNIVGGKRK GDKHSMDNHN LEEEAKESVN KRRKNAEHTG STVAQAPHND 120
GHQWRKYGQK WISRAKHSRS YYRCANSKMQ GCPATKTVQQ MDSSGNGTSK LFNVDYYGQH 180
ICRGDGIANP CVVDTAYHSM EPINQTKCNS PTLEHEAHEV QDERFENLCM LQNMPEYLIE 240
FELERAFEFT VNSPLGSEHL MFDDSIRCEQ SPICIWG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK102093 | 0.0 | AK102093.1 Oryza sativa Japonica Group cDNA clone:J033083A06, full insert sequence. |
