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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC11G12340.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 228aa MW: 24942.1 Da PI: 6.6694 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC11G12340.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 68.2 | 2.3e-21 | 18 | 127 | 1 | 107 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lp G+ F+Pt+ elvv+yL +++ +++l++ ++i+++di ++Pwd+ ++++++ +fF++++++++ ++ ++ a+ +g+W+ g++ ++++
OPUNC11G12340.1 18 LPTGCVFRPTEGELVVDYLYRRAIQEPLPC-DFITDADIQCHNPWDIV-PAEEKKNGKHFFTRKENSHPGDHGRSHAAGDGFWRLAGREVPIYN 109
699***************************.99**************5.456677899***********999999999**************** PP
NAM 95 k.....kgelvglkktLv 107
k +++lvg+k+tL
OPUNC11G12340.1 110 KssggaDEKLVGTKRTLK 127
9988888888******96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MAGPGVCINL LNGTTMHLPT GCVFRPTEGE LVVDYLYRRA IQEPLPCDFI TDADIQCHNP 60 WDIVPAEEKK NGKHFFTRKE NSHPGDHGRS HAAGDGFWRL AGREVPIYNK SSGGADEKLV 120 GTKRTLKNSG SPSDAQTLVP LVETMVEPDS SWMICRIYKK RQRAPHVIVP PFIGSARKAV 180 LAVPAIGNAG DAQVHFIDFP GHRCFEEGSD ESSDVITNDK DGDGHGKN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC136150 | 4e-91 | AC136150.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBa0023F12, complete sequence. |
GenBank | AP014967 | 4e-91 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |