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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC11G09340.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
AP2 |
Protein Properties |
Length: 533aa MW: 57487.4 Da PI: 6.6806 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC11G09340.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 34.4 | 5.7e-11 | 117 | 173 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV+ ++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g
OPUNC11G09340.1 117 SIYRGVTKHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 173
57*******************4444.2455535555.779999**************98 PP
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2 | AP2 | 51.3 | 2.9e-16 | 216 | 267 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g
OPUNC11G09340.1 216 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 267
57****************988532...5************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 533 aa
Download sequence Send
to blast |
MVAAAGGEEA PKLEDFLGMQ ETAAAAGHGR GGSSVGLSMI KNWLRSQPAP PAVVGGDAMM 60 ALAVSASASP AVDVTAAATS PDGMGMKTAD GGGESGGAAE AAQRMKAAMD TFGQRTSIYR 120 GVTKHRWTGR YEAHLWDNSC RREGQTRKGR QGGYDKEEKA ARAYDLAALK YWGTTTTTNF 180 PVSNYEKELD DMKHMNRQEF VASLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN 240 KDLYLGTFGT QEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VKSIIESSNL PIGTGTTRRL 300 KDSSDNHTVN AVMDINVNTD ANNAVASQFS NGVGHHDSQH YVYNGWSPIS MQPIPLQYAN 360 GQSRAWLKQE QDSSAVAAQN LHNLHHFTSL GYTHNFFQQS DVPDVTGFVD VPSRSGDSYS 420 FRYNGTNGFH GLPGGISYAT PVATAVDQGQ GIHGYGEDGV AGIDTTHDLC GSRNVYYLPE 480 GSLVADVEKY GHYGQSVGGN SWVLPTPESE MVEKADNVTV CHGMPLFSVW NDA
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that promotes cell proliferation, differentiation and morphogenesis, especially during embryogenesis. {ECO:0000269|PubMed:12172019}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK287621 | 0.0 | AK287621.1 Oryza sativa Japonica Group cDNA, clone: J065066I09, full insert sequence. |