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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC11G04660.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 314aa MW: 34073.5 Da PI: 6.7064 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC11G04660.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 61.6 | 2.5e-19 | 54 | 191 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgk..rknratk..sgyWk.atgkd 89
p f+F+Ptd ++v yL +++ + + +++++ e d+ ++ePw+L +v+++ + fF++ + + g+ + +ra+k g+W+ ++g+
OPUNC11G04660.1 54 PAFKFDPTDADIVASYLLPRALYGRgHAAATAVIEDDVSRCEPWTLM-RVHGHAASAhAFFVHDHPDSGGGRrrKVQRAVKngGGVWRiQKGEV 146
78***************9997766636666678899**********7.55555554414555555544433311344554455889*9555664 PP
NAM 90 kevlsk........kgel..vglkktLvfykgrapkgektdWvmheyrl 128
+++ + l v ++ L f+ r+ +++ + Wvmhey++
OPUNC11G04660.1 147 ATLTIVrdgdgvggD--LdvVYKRRNLSFH--RHGESSTSGWVMHEYEI 191
444443445555433..1559999******..5666679********86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MASASRKRSA RSRQEDEQSS SAAAAAAVAE EEEGVAVAGM EAWRFGFSKF SEFPAFKFDP 60
TDADIVASYL LPRALYGRGH AAATAVIEDD VSRCEPWTLM RVHGHAASAH AFFVHDHPDS 120
GGGRRRKVQR AVKNGGGVWR IQKGEVATLT IVRDGDGVGG DLDVVYKRRN LSFHRHGESS 180
TSGWVMHEYE ITSPPLNATV LSRIRATSRA KDKKLGIKEE PSTSAAGDGE RTVPNPDHNA 240
GGDSNHGYYS GDNNYDNGGV VQYYPDQPGP SHQCCYGEQV AGNGFVTGDD GGEPLHLYET 300
FQSPKKMIRT YLIN
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC134044 | 0.0 | AC134044.4 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBa0019D06 map S10616A, complete sequence. |
| GenBank | AP014967 | 0.0 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
