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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC11G03940.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 316aa MW: 32578.1 Da PI: 5.6668 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC11G03940.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66 | 7.5e-21 | 130 | 179 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa+a+++a+++++g
OPUNC11G03940.1 130 RYRGVRQRP-WGKWAAEIRDPV----KaARVWLGTFDTAEAAARAYDEAALRFRG 179
8********.**********64....55************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MCCGKVASPP GPRLPRLAGA GGEDEEEEAA AAAGMLSRHG QAREMTVMVS ALARVVAGGG 60 GGGGVGAEEA WWPPAYGGAP LPPSPSPAAH EHTAAMAAGQ YAPATASPHE QASSPSSTDA 120 SAGGGTGRKR YRGVRQRPWG KWAAEIRDPV KAARVWLGTF DTAEAAARAY DEAALRFRGC 180 RAKLNFPEDA ALLPPPPPAP APAPTETTMP SQSQGMVDGQ EYSEYARFLQ GAGEPPHFLE 240 QIMDSPRPST AAGASSSGQS SFPLLYSFAG HELGNEPNLA RPPESGGAGD GRRGSPPPAT 300 WPDYGWGAPP PWDPSR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012619 | 0.0 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |