PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G03550.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family TALE
Protein Properties Length: 632aa    MW: 65779 Da    PI: 6.4115
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G03550.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.92e-093403771954
                      HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
         Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                      Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  OPUNC11G03550.1 340 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 377
                      664459******************************88 PP
2BELL116.21.6e-37236306171
             BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 
                      erqelq+kk kL+++l+eV++rY+qy++q+q+v++sFeavag gsa+ Yt+lAl++iSr+FrcL+daia q
  OPUNC11G03550.1 236 ERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTISRQFRCLRDAIAAQ 306
                      79******************************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.8E-61153305IPR006563POX domain
PfamPF075264.5E-50158304IPR006563POX domain
PROSITE profilePS5007112.26318381IPR001356Homeobox domain
SMARTSM003892.6E-9321385IPR001356Homeobox domain
CDDcd000866.08E-13321382No hitNo description
SuperFamilySSF466892.69E-17322388IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.0E-29324387IPR009057Homeodomain-like
PfamPF059202.4E-18338377IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009610Biological Processresponse to symbiotic fungus
GO:0009737Biological Processresponse to abscisic acid
GO:0010197Biological Processpolar nucleus fusion
GO:0010201Biological Processresponse to continuous far red light stimulus by the high-irradiance response system
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 632 aa     Download sequence    Send to blast
MAAYYHGGAG TDIQSSTDGL QTLYLMNPSY AGYSDAAAAP GAAANMMLLN SAVTSMTPVS  60
FGHQPSPSSS AQHFVGIPLQ PPASGYNLWS TGAGDMSPPT PQHQHQQAHG GGGAAGVSAV  120
LSLSSREAAP PVTVAAVVAG GDEGKYLQVQ GATSQGQMVM SSKYLKAAQE LLDEVVSVSK  180
GVDDAKAAAA AAAAAKSPAS VKKKEDSEGV SAGGTEDGGG AKSGGAPPPP EMSTAERQEL  240
QMKKGKLINM LDEVEQRYRQ YHQQMQVVVA SFEAVAGGGS ARTYTALALR TISRQFRCLR  300
DAIAAQQRAL QQLGMMQSSA WRPQRGLPER SVNILRSWLF EHFLHPYPKD SDKIMLAKQT  360
GLTRSQVSNW FINARVRLWK PMVEEMYLEE TKDQDGGAGT GDEGNKPGGS KGGVVNGVVV  420
DSAAKMDSKA VHMESGGGVH ASLLELAGDH QAQAGFYDDD DDEDGGAAAL QQKLKKARTE  480
EQHQQQQAAF HVSDVATLHA QAAAAAAARH DEVSHRELLM KFMESGTAGA GARDHHHEHH  540
GGGGGYSLFA PAPYGQFASE QFAFAGHGGG VSLTLGLPHG AEQTASFLMS SSNGSDGGSH  600
GVAGGGGGGG GYDMNMQSTK SFAAQLMRDF VA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5bng_A1e-17327385159Homeobox protein Meis2
5bng_B1e-17327385159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1332170.0AC133217.2 Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence.
GenBankAP0149670.0AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616922.10.0BEL1-like homeodomain protein 1
RefseqXP_015616923.10.0BEL1-like homeodomain protein 1
RefseqXP_015616924.10.0BEL1-like homeodomain protein 1
RefseqXP_015616925.10.0BEL1-like homeodomain protein 1
TrEMBLA0A0E0MCQ30.0A0A0E0MCQ3_ORYPU; Uncharacterized protein
STRINGOPUNC11G03550.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48163758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.35e-71BEL1-like homeodomain 1