PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC11G03040.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 509aa MW: 56109 Da PI: 7.0651

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC11G03040.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.8	8.8e-12	205	233	5	33
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le OPUNC11G03040.1 205 KTMRRLAQNREAARKSRLRKKAYIQQLES 233 6679***********************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	8.887	203	247	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.9E-7	203	241	No hit	No description
CDD	cd14708	1.24E-20	205	256	No hit	No description
Pfam	PF00170	7.1E-9	205	234	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.69E-7	205	238	No hit	No description
PROSITE pattern	PS00036	0	208	223	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.3E-29	284	358	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence Send to blast
MRNSVAHETP SVFIILLKLF TTHQSWLLRM GEASSSGHSR QNPHVLGYGF HGTMPTSMPS 60 ANFFEQQGGA TYFGELEEAL MQQVATLRRT QQTATTTSTL HHGDTTPFST TATARPPPTL 120 DIFPSWPMRS LHTPKEGSNV TADTTDSESS SKNNSNQNGS SDQHGLVGDM AGQFDQIPQQ 180 QQQHKKMATN SPTHSSKTGK ALDPKTMRRL AQNREAARKS RLRKKAYIQQ LESSKLKLAQ 240 MEQDIHRARS QGLLLGAPGG NTSSGAVMFD VDYARWLEED SRRMAELHGG LHAHLPDSDL 300 RAIVDDTLTH YDHLFNLKGM AAKADVFHLI TGMWATPAER CFLWMGGFRP SELLKTLIPQ 360 LDPLTEQQVV GICNLQQSSQ QAEEALSQGL DQLHQSLAET VAGGSPLDDA NVGSFMGHMA 420 IALGQLSNLE GFVIQADNLR QQTIHQMHRI LTVRQAARCF LAIGEYHNRL RALSSLWASR 480 PREILVADEG NCGELSIAAH PSESQYSAF

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence Send to blast

MRNSVAHETP SVFIILLKLF TTHQSWLLRM GEASSSGHSR QNPHVLGYGF HGTMPTSMPS  60
ANFFEQQGGA TYFGELEEAL MQQVATLRRT QQTATTTSTL HHGDTTPFST TATARPPPTL  120
DIFPSWPMRS LHTPKEGSNV TADTTDSESS SKNNSNQNGS SDQHGLVGDM AGQFDQIPQQ  180
QQQHKKMATN SPTHSSKTGK ALDPKTMRRL AQNREAARKS RLRKKAYIQQ LESSKLKLAQ  240
MEQDIHRARS QGLLLGAPGG NTSSGAVMFD VDYARWLEED SRRMAELHGG LHAHLPDSDL  300
RAIVDDTLTH YDHLFNLKGM AAKADVFHLI TGMWATPAER CFLWMGGFRP SELLKTLIPQ  360
LDPLTEQQVV GICNLQQSSQ QAEEALSQGL DQLHQSLAET VAGGSPLDDA NVGSFMGHMA  420
IALGQLSNLE GFVIQADNLR QQTIHQMHRI LTVRQAARCF LAIGEYHNRL RALSSLWASR  480
PREILVADEG NCGELSIAAH PSESQYSAF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK069411	0.0	AK069411.1 Oryza sativa Japonica Group cDNA clone:J023013G15, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015617800.1	0.0	transcription factor TGAL4 isoform X1
Swissprot	Q53Q70	0.0	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A0E0MCJ4	0.0	A0A0E0MCJ4_ORYPU; Uncharacterized protein
STRING	OPUNC11G03040.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-140	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]