PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G02270.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 798aa    MW: 85503.2 Da    PI: 4.0989
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G02270.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.8e-18191461126
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk...kvkaeekewyfFskrdkkyatgk.....rknr.atksgyWk 84 
                      +p G+ F P+ e+l+ +yL++ ++g+++e+ + i +v d+y ++P  L +   ++ ++ k+wyf + ++ k  +g      r nr +   g+W+
  OPUNC11G02270.1  19 VPSGYYFAPKPEQLIRDYLNHWITGRPIEELRGIVRVaDVYGSDPAALTEahkAYGHDGKSWYFLTVTKWKGGRGAagaagRLNRwVEGGGTWH 112
                      589************************99988877666**********8423344447789*****9999988665666669999777799*** PP

              NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmhey 126
                      ++ + + +        g ++ + +   rap  +ktdW+m+e 
  OPUNC11G02270.1 113 NSQRRRVIEG-----YGDRQAFEY---RAPGNKKTDWLMEEI 146
                      9988666654.....899999998...599999*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.63E-2017168IPR003441NAC domain
PROSITE profilePS5100521.93719168IPR003441NAC domain
PfamPF023653.8E-1020145IPR003441NAC domain
SuperFamilySSF545292.62E-6408546IPR003428Mitochondrial glycoprotein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005759Cellular Componentmitochondrial matrix
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 798 aa     Download sequence    Send to blast
MAQQDDHKKP KEEGPDVTVP SGYYFAPKPE QLIRDYLNHW ITGRPIEELR GIVRVADVYG  60
SDPAALTEAH KAYGHDGKSW YFLTVTKWKG GRGAAGAAGR LNRWVEGGGT WHNSQRRRVI  120
EGYGDRQAFE YRAPGNKKTD WLMEEIASNL PEATTDEGIM VICKVYLSPR AKEAPAPELA  180
DEEERQETNV VPGPKRLREP EVTGYDAPPQ PDVGCSYSGG GGGGGETSQA TASMDYYCST  240
TTHTTDDPTN AAYYYGGMDA VKPEAYDGDN FGIAINADGE LVLCGYGDGG IGTQGQMPLA  300
MQNINGEMTL FPPMNGYGVD SQVEDDAGLD DFFNDVLVDF NCAGDPNGGC FAEVSLKYLG  360
GADLGLVQGA AFEVGHPAEA AAALATDSGV MLLRRLAASA LRRGGAKDGG VLAAVRAEIA  420
HELSSSPSSS PPTLQSQDIP DFSTVSDPQR GQEVLLCCRD ASEEVLVSAV LAPLRFEGEE  480
PLPRDALMKV FVSKPDVKPV MRFDCRAFAD EGDGGSADYD VTAACYHSFA GDAGEDKYEG  540
PEFSMLIVND IIAFEYRAPG NKKTDWLMEE IASNLPEATT DDGIMVICKV YLSPRAKEAP  600
APELADEEER QETNVVPGPK RLREPEVTGY DAPPQPDVGC SYSGGGGGET SQATASMDYY  660
CSTTTHTADD PANAAYYYGD VDAIKPEAYD GDDYGIAINA DGKLVLCGYG DGGIGTQGQV  720
PLAMQNINGE MTLFPPMNSY GVDSQVEDDA GLDDFFNDVL VNFDCAGDPN GGGDSHGHSN  780
NDTIWYQQIP LFHTLKDV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126200.0CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0MC970.0A0A0E0MC97_ORYPU; Uncharacterized protein
STRINGOPUNC11G02270.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP114741834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.11e-09NAC domain containing protein 64