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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC11G01340.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 356aa MW: 39651.7 Da PI: 8.7673 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC11G01340.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 169.2 | 1.4e-52 | 14 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
lppGfrFhPtd e++ yL +k + +++ i evd++k+ePwdLp+k+k +ekewyfFs++d ky+tg r+nratk+gyWkatgkd+e+++
OPUNC11G01340.1 14 LPPGFRFHPTDAEVILSYLLQKFLNPSFTS-LPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFK 106
79*************************888.56***************99999****************************************9 PP
NAM 95 k.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++lvg+kktLvfy grapkg+kt+Wvmhe+rl
OPUNC11G01340.1 107 PticknNKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL 145
9999988899***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MVELVKSELG GLFLPPGFRF HPTDAEVILS YLLQKFLNPS FTSLPIGEVD LNKCEPWDLP 60
SKAKMGEKEW YFFSHKDMKY PTGMRTNRAT KEGYWKATGK DREIFKPTIC KNNKQLVGMK 120
KTLVFYMGRA PKGTKTNWVM HEFRLHANLH NDHPNLRLNP KDEWVVCKVF HKKQGDEAIN 180
KQQQQAAVEY SAGTPNSSSS VVQAGGDDFF QLDDIFIDPA SIYFSNSSNI LSAPPNNNAV 240
YSVSASTTTT STTASSFQQQ PNCYSAPLQQ HVSSWNNTPG VLHGNGSSYN LLLQQQAAMV 300
KALENVIAVP DYGTLLPSSN KGSSIRSATA GVSQQNPLGV PQYKIENYGD HYISRE
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-52 | 9 | 173 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-52 | 9 | 173 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-52 | 9 | 173 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-52 | 9 | 173 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-52 | 9 | 173 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 8e-52 | 9 | 173 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 8e-52 | 9 | 173 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 8e-52 | 9 | 173 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 8e-52 | 9 | 173 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 8e-52 | 9 | 173 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 8e-52 | 9 | 173 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 8e-52 | 9 | 173 | 15 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 8e-52 | 9 | 173 | 12 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 8e-52 | 9 | 173 | 12 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in stress response (By similarity). Binds to DNA-specific sequences of CLPD1 and OAT promoters in vitro (PubMed:18813954). {ECO:0000250|UniProtKB:Q7F2L3, ECO:0000269|PubMed:18813954}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC123519 | 1e-154 | AC123519.2 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence. |
| GenBank | AC123525 | 1e-154 | AC123525.2 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence. |
| GenBank | AK288271 | 1e-154 | AK288271.1 Oryza sativa Japonica Group cDNA, clone: J090017A22, full insert sequence. |
| GenBank | AP014967 | 1e-154 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
