 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC11G00930.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 339aa MW: 38200.4 Da PI: 5.9537 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC11G00930.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 73.2 | 3.4e-23 | 141 | 202 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59
+Dgy+WrKYG K+++g++f+rsY+rCt++ gC+++k+++++ ++dp ++++tY+++H+++
OPUNC11G00930.1 141 EDGYQWRKYGEKKIHGTHFTRSYFRCTYRddrGCQATKQIQQKdNNDPPMFQVTYSNDHTCN 202
8***************************99999*******8751679*************96 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MAVADSVCLS DEQEEAVAVR EVAQVYELIK TQQPLLLVHQ QPQQLAYSLL NHALRALNVA 60
LSVMNQPHAS SSPAHDHHIP AINMNMINAE STPPANSSAP AADVADNHVV GKARRSSPAK 120
RRRINCEDKS SWVNHTVVPH EDGYQWRKYG EKKIHGTHFT RSYFRCTYRD DRGCQATKQI 180
QQKDNNDPPM FQVTYSNDHT CNFVCKATRI INNTNNNPAA LHNLTANPNA HPDDDDDTIF 240
TKMIKQEQQA AWLLPPHLTT ISNNFDETQG LHVHQEVPPS SSNSSVISHY ADEFDHHQMG 300
QQLETTVMEE ALGLGADLDD PYFYDPNLLL IYENLMNCY
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP014968 | 0.0 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
| GenBank | BX842244 | 0.0 | BX842244.3 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0006G23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
