PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G00930.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 339aa    MW: 38200.4 Da    PI: 5.9537
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G00930.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.23.4e-23141202259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                      +Dgy+WrKYG K+++g++f+rsY+rCt++   gC+++k+++++ ++dp ++++tY+++H+++
  OPUNC11G00930.1 141 EDGYQWRKYGEKKIHGTHFTRSYFRCTYRddrGCQATKQIQQKdNNDPPMFQVTYSNDHTCN 202
                      8***************************99999*******8751679*************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-24133202IPR003657WRKY domain
SuperFamilySSF1182905.62E-21134203IPR003657WRKY domain
SMARTSM007742.6E-32140203IPR003657WRKY domain
PROSITE profilePS5081117.006141199IPR003657WRKY domain
PfamPF031062.2E-24141201IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MAVADSVCLS DEQEEAVAVR EVAQVYELIK TQQPLLLVHQ QPQQLAYSLL NHALRALNVA  60
LSVMNQPHAS SSPAHDHHIP AINMNMINAE STPPANSSAP AADVADNHVV GKARRSSPAK  120
RRRINCEDKS SWVNHTVVPH EDGYQWRKYG EKKIHGTHFT RSYFRCTYRD DRGCQATKQI  180
QQKDNNDPPM FQVTYSNDHT CNFVCKATRI INNTNNNPAA LHNLTANPNA HPDDDDDTIF  240
TKMIKQEQQA AWLLPPHLTT ISNNFDETQG LHVHQEVPPS SSNSSVISHY ADEFDHHQMG  300
QQLETTVMEE ALGLGADLDD PYFYDPNLLL IYENLMNCY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-12134201168OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119123KRRRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0149680.0AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence.
GenBankBX8422440.0BX842244.3 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0006G23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015619940.10.0probable WRKY transcription factor 69 isoform X1
TrEMBLA0A0E0MBR10.0A0A0E0MBR1_ORYPU; Uncharacterized protein
STRINGOPUNC11G00930.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-19WRKY family protein