 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC10G18230.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 283aa MW: 31115.9 Da PI: 8.6386 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC10G18230.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.9 | 1.4e-30 | 165 | 223 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp+++++tY+++Hnh+
OPUNC10G18230.1 165 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRADPTMLVVTYTSDHNHP 223
699************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MSISQMMRQQ VEKPSKKAKM SQWREAWAAP RPARESSADQ GDLSDVVRAS LQLQTAPRDQ 60
AASPPYVHLL GGEDELAVVS QHADEQPISM DACDLLHALL PPVVQVQQQG ASVTGEEPVA 120
ELFAGAHHHH LHVVPPIKRR PSQTKKVVCI PAPTAGTSGG EVVPSDLWAW RKYGQKPIKG 180
SPYPRGYYRC SSSKGCSARK QVERSRADPT MLVVTYTSDH NHPWPTHRNA LAGSTRPSSS 240
SNSNIPAGLL LQLQHSSHHH LITTTTITHL KQEDDDHHQP SWT
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KC954610 | 1e-137 | KC954610.1 Oryza sativa Japonica Group cultivar Dongjin WRKY2 mRNA, complete cds. |
