PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC10G07810.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NF-YA | ||||||||
Protein Properties | Length: 153aa MW: 16895.9 Da PI: 10.0436 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 24.3 | 1e-07 | 89 | 110 | 37 | 58 |
CBFB_NFYA 37 pylheSRhkhAlrRpRgsgGrF 58 ++l eSR+k+A+ R+Rg+gGrF OPUNC10G07810.2 89 RILVESRQKQAKLRRRGKGGRF 110 6899*****************9 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MRRRYSAGRW EERKRGRGKL IYIGDKEGGR TTEGVPSCKS HVDIMGVGES NHVNQSKLDG 60 LGEVSTDLSL ANQEANSVHP KPEHIQPLRI LVESRQKQAK LRRRGKGGRF ISTEHPLEPY 120 VDDQLSKNGG KISPCTSTTS ENSSNVNVFA GDV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015697306.1 | 4e-37 | PREDICTED: nuclear transcription factor Y subunit alpha-like | ||||
TrEMBL | A0A0E0M7E1 | 1e-109 | A0A0E0M7E1_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC10G07810.1 | 1e-87 | (Oryza punctata) |