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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC10G06870.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 313aa MW: 32771 Da PI: 8.2262 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC10G06870.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.7 | 6.9e-19 | 123 | 172 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+++tae+Aa a++ a+ +l+g
OPUNC10G06870.1 123 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTYDTAEDAALAYDGAAFRLRG 172
59******9.**********955...5*************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MDRQWRCLAA AASTSGSSKL PPLPMALGGS VEYGQLVHGS AAPFVVDAEQ QSLSPATAMV 60 LGAGWYNLVM PAQAAQLHHR LRRAVGTGGG GCGFGPAPCA MKRRGGMVGR LALVAPVPAP 120 AKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTYDTAEDAA LAYDGAAFRL RGDAARLNFP 180 ELRRGGQHHA PPLSASVDAK ILQATTTADH AAAASPASAN TPPPQAVVKT EPGCCSVSEA 240 STTTTADAAD VSSTGSSPSP TPSNPGAAPP APAPPLPETM QQLDFTEAPW DEADGFALRR 300 YPSWEIDWDA ILS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC107314 | 0.0 | AC107314.1 Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1208D02 from chromosome 10, complete sequence. |
GenBank | AC134516 | 0.0 | AC134516.1 Oryza sativa Japonica Group chromosome 10 clone OJA1208D02, complete sequence. |
GenBank | AP014966 | 0.0 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |
GenBank | CP012618 | 0.0 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |