 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC10G05310.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 272aa MW: 30333.1 Da PI: 7.3704 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC10G05310.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 66.4 | 4.6e-21 | 63 | 124 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59
Dg+ WrKYG K++k+s fpr YYrC+++ +C+++k v++++ dp + +tY +H+++
OPUNC10G05310.1 63 TDGHLWRKYGEKKIKNSSFPRLYYRCSYRddrNCMATKVVQQENdADPPLYRVTYIHTHTCN 124
7***************************99999*******9865269*************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MASRHQLQTM QFMDQASRSR SPRPDGVHGP PPPTPMSSPF SSRKPRVQEG QPTCVNLTPI 60
PHTDGHLWRK YGEKKIKNSS FPRLYYRCSY RDDRNCMATK VVQQENDADP PLYRVTYIHT 120
HTCNPLPPAP TPASVFTEPP SAKAEHHAVL FRFSSTSGGH MANADHPAVH HQQWQPAATT 180
MVAQAHQLSM MCDDEQQAAA IRSGPPARRL SMFRAVVDGL RQMRSSAPPP SSTVVDGGWD 240
TFSSFNLDTC EFSIDDELLC GDLMYSPDSM QE
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC099774 | 1e-156 | AC099774.6 Oryza sativa chromosome 10 BAC OSJNBa0073L20 genomic sequence, complete sequence. |
| GenBank | AP014966 | 1e-156 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012618 | 1e-156 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |
