 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC09G17350.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
NAC |
Protein Properties |
Length: 584aa MW: 65518.6 Da PI: 5.7591 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC09G17350.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 173.9 | 4.8e-54 | 113 | 242 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhPtdeelv++yLk+k++g k+el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v
OPUNC09G17350.1 113 LPPGFRFHPTDEELVNYYLKRKIHGLKIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRV 205
79****************************.99**************84335556888************************************ PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ +g+++g+kktLv+y+grap+g++tdWvmheyrl
OPUNC09G17350.1 206 VHQhGGRAIGMKKTLVYYRGRAPQGVRTDWVMHEYRL 242
99978899***************************98 PP
|
2 | NAM | 172.4 | 1.4e-53 | 369 | 496 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhPtdeelv++yLk+kv+g ++el ++i+evd+yk+ePw+L k + ++++ewyfF +rd+ky++g r+nrat++gyWk+tgkd+++
OPUNC09G17350.1 369 LPPGFRFHPTDEELVNYYLKRKVHGLSIEL-DIIPEVDLYKCEPWELAeKsFLPSKDSEWYFFGPRDRKYPNGCRTNRATRAGYWKSTGKDRRI 461
79****************************.99**************84335566899************************************ PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ +g+kktLv+ykgrap+g +t+Wvmheyr+
OPUNC09G17350.1 462 NY-QNRSIGMKKTLVYYKGRAPQGIRTSWVMHEYRI 496
*9.8899***************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 584 aa
Download sequence Send
to blast |
MEKVQASCEG EQGICKRGAK GGHPIDRNLV GGMTTSTAVP TTVPPTPALA ALKNLLIRVV 60 AAAAGKGLSG SSAEEARCLW AKPSAPEEET GQLERPPSHR RPPTSTFMAP VGLPPGFRFH 120 PTDEELVNYY LKRKIHGLKI ELDIIPEVDL YKCEPWELAE KSFLPSRDPE WYFFGPRDRK 180 YPNGFRTNRA TRAGYWKSTG KDRRVVHQHG GRAIGMKKTL VYYRGRAPQG VRTDWVMHEY 240 RLDDKDCEDT MPIQDTYALC RVFKKNAICT EVEELQGQCS MALLEGACQQ LLASGGGGSQ 300 EQYETPSPPD VPVGSTSGGA DAEDDPDKDD SWMQFISDDA WCSSTADGGA EESTSCEEAN 360 WEAMAPVGLP PGFRFHPTDE ELVNYYLKRK VHGLSIELDI IPEVDLYKCE PWELAEKSFL 420 PSKDSEWYFF GPRDRKYPNG CRTNRATRAG YWKSTGKDRR INYQNRSIGM KKTLVYYKGR 480 APQGIRTSWV MHEYRIEESE CENTMGIQDS YALCRIFKKN VVLGEFDKKG ECSSSQAKGN 540 EEQVTDFGDA GQSSGANEND KDNSWMQFIA EDLWCTNKLK SLFT
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-51 | 108 | 520 | 10 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-51 | 108 | 520 | 10 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-51 | 108 | 520 | 10 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-51 | 108 | 520 | 10 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-51 | 108 | 520 | 13 | 170 | NAC domain-containing protein 19 |
3swm_B | 3e-51 | 108 | 520 | 13 | 170 | NAC domain-containing protein 19 |
3swm_C | 3e-51 | 108 | 520 | 13 | 170 | NAC domain-containing protein 19 |
3swm_D | 3e-51 | 108 | 520 | 13 | 170 | NAC domain-containing protein 19 |
3swp_A | 3e-51 | 108 | 520 | 13 | 170 | NAC domain-containing protein 19 |
3swp_B | 3e-51 | 108 | 520 | 13 | 170 | NAC domain-containing protein 19 |
3swp_C | 3e-51 | 108 | 520 | 13 | 170 | NAC domain-containing protein 19 |
3swp_D | 3e-51 | 108 | 520 | 13 | 170 | NAC domain-containing protein 19 |
4dul_A | 3e-51 | 108 | 520 | 10 | 167 | NAC domain-containing protein 19 |
4dul_B | 3e-51 | 108 | 520 | 10 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC137596 | 0.0 | AC137596.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 9 clone OSJNBb0031H05, complete sequence. |
GenBank | AP005564 | 0.0 | AP005564.2 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:OJ1228_C03, complete sequence. |
GenBank | AP014965 | 0.0 | AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence. |