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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC09G15600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
HD-ZIP |
Protein Properties |
Length: 246aa MW: 27176.2 Da PI: 5.9852 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC09G15600.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 61 | 1.8e-19 | 28 | 80 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +f++eq++ Le++F+ + ++ +++ +LA++lgL+ rqV +WFqN+Ra++k
OPUNC09G15600.1 28 KKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWK 80
456*************************************************9 PP
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2 | HD-ZIP_I/II | 119.7 | 1.5e-38 | 27 | 115 | 2 | 90 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+k+r+s+eq+k+LE++F +++kLep++K +lareLglqprqva+WFqn+RAR+k+kqlE++y+aL++ ydal + e+L+ke+ +L ++
OPUNC09G15600.1 27 RKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQ 115
8**********************************************************************************999866 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MDGEEDSEWM MMDVGGKGGK GGGAADRKKR FSEEQIKSLE SMFATQTKLE PRQKLQLARE 60 LGLQPRQVAI WFQNKRARWK SKQLEREYSA LRDDYDALLC SYESLKKEKL ALIKQARLEK 120 LAEMLQEPRG KYGDNAGAAG NDVRSGGIAG MKKEEFVDAG GATLYSSAEG GGTTTTAKLM 180 SHFGSDDVDA GLFLRPSSQH PPPHTGAGFT SSEPAADHHS FNFHSSWPSS TEQTCSSTPW 240 WEFESE
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
UniProt | Probable transcription factor that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK059755 | 0.0 | AK059755.1 Oryza sativa Japonica Group cDNA clone:006-203-C03, full insert sequence. |
GenBank | AK103160 | 0.0 | AK103160.1 Oryza sativa Japonica Group cDNA clone:J033121C04, full insert sequence. |
GenBank | CT830847 | 0.0 | CT830847.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN030P03, full insert sequence. |