 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC09G10660.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 375aa MW: 39427.8 Da PI: 7.7728 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC09G10660.3 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 35.8 | 1.4e-11 | 216 | 244 | 28 | 56 |
HHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 28 eereeLAkklgLterqVkvWFqNrRakek 56
+++ LAk+l+L rqV vWFqNrRa+ k
OPUNC09G10660.3 216 KQKLALAKQLNLRPRQVEVWFQNRRARTK 244
567789*********************98 PP
|
| 2 | HD-ZIP_I/II | 91 | 1.4e-29 | 214 | 280 | 25 | 92 |
HD-ZIP_I/II 25 eperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
e+++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
OPUNC09G10660.3 214 EQKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELR-ALK 280
7899***********************************************************9.555 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MELGLSLGEA MADAGRELVL GLGMGRREEA AAAAETGRRD HEVRRELEFG SRSSRCGGSS 60
PEPTVRLTLL PMGHLEASTR GFDVNRPPSS GGGAGAAEEE QDDVAGAALS SSPNNSAGSF 120
PMDDFSGHGL GGNDAAPGGG GGGGDRSCSR ASDEDDGGSA RKKLRLSKEQ SAFLEESFKE 180
HSTLNPVSLS SSHRSNTSSF PSPNVASRLA LCREQKQKLA LAKQLNLRPR QVEVWFQNRR 240
ARTKLKQTEV DCEYLKRCCE TLTEENRRLQ KELAELRALK TVHPFYMHLP ATTLSMCPSC 300
ERVASNSVPA TAASAAAPAT AAQPTAPSSG GIAATSAAAA APDHRPSSFA ALFSSPRRFP 360
LSVAPQAQAQ PPTSS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 238 | 246 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP012617 | 0.0 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |
