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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC09G10660.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
HD-ZIP |
Protein Properties |
Length: 382aa MW: 40084.6 Da PI: 6.1846 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC09G10660.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 55.7 | 8.3e-18 | 197 | 251 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
OPUNC09G10660.1 197 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 251
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 127 | 8.3e-41 | 197 | 287 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
OPUNC09G10660.1 197 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELR-ALK 287
69*************************************************************************************9.555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MELGLSLGEA MADAGRELVL GLGMGRREEA AAAAETGRRD HEVRRELEFG SRSSRCGGSS 60 PEPTVRLTLL PMVPGLGLPW PPPPPAASES SECDGWAWAD VICVVGWQGH LEASTRGFDV 120 NRPPSSGGGA GAAEEEQDDV AGAALSSSPN NSAGSFPMDD FSGHGLGGND AAPGGGGGGG 180 DRSCSRASDE DDGGSARKKL RLSKEQSAFL EESFKEHSTL NPKQKLALAK QLNLRPRQVE 240 VWFQNRRART KLKQTEVDCE YLKRCCETLT EENRRLQKEL AELRALKTVH PFYMHLPATT 300 LSMCPSCERV ASNSVPATAA SAAAPATAAQ PTAPSSGGIA ATSAAAAAPD HRPSSFAALF 360 SSPRRFPLSV APQAQAQPPT SS
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 245 | 253 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT036447 | 1e-170 | BT036447.1 Zea mays full-length cDNA clone ZM_BFb0114O05 mRNA, complete cds. |
GenBank | KJ726911 | 1e-170 | KJ726911.1 Zea mays clone pUT3456 HB transcription factor (HB11) mRNA, partial cds. |