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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC09G08810.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
ZF-HD |
| Protein Properties |
Length: 109aa MW: 11520.8 Da PI: 8.2165 |
| Description |
ZF-HD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC09G08810.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | ZF-HD_dimer | 92.4 | 3.9e-29 | 19 | 88 | 1 | 60 |
ZF-HD_dimer 1 kekvrYkeClkNhAaslGghavDGCgEfmpsegeegt..........aaalkCaACgCHRnFHRreveee 60
+++vrY eC++NhAas+GghavDGC+Ef+++e+ g aaalkCaACgCHR+FHRr +++e
OPUNC09G08810.1 19 CCGVRYGECRRNHAASTGGHAVDGCREFIAAEDGGGGgnntgavavaAAALKCAACGCHRSFHRRVQVYE 88
5789***************************8877435799*****99*****************99876 PP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Inhibits zinc finger homeodomain (ZHD) transcription factors, by interacting with them to prevent both their nuclear localization and their DNA-binding properties. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK058840 | 1e-124 | AK058840.1 Oryza sativa Japonica Group cDNA clone:001-004-D10, full insert sequence. |
| GenBank | AP005636 | 1e-124 | AP005636.2 Oryza sativa Japonica Group genomic DNA, chromosome 9, PAC clone:P0707C02. |
| GenBank | AP014965 | 1e-124 | AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012617 | 1e-124 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |
| GenBank | CT830576 | 1e-124 | CT830576.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN030C08, full insert sequence. |
