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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC09G08600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 294aa MW: 31581.1 Da PI: 6.8369 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC09G08600.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 150 | 1.1e-46 | 23 | 164 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL...pk.....kvkaeekew.yfFskrdkkyatgkrknratksgyWka 85
lppGfrF+Ptd elv +yL++k+++ +++ ++i++vd+y++ePwdL p+ +++ee+++ yfF++r+ + ++g+r+nrat++gyWk+
OPUNC09G08600.1 23 LPPGFRFRPTDGELVAHYLARKAADAGFTC-TAIRDVDLYRAEPWDLlppPReaaadGAEEEEERCgYFFCTRSFRWPSGTRTNRATAAGYWKS 115
79**************************99.88**************75323565542223333448*************************** PP
NAM 86 tgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
tgkdk+vl++ +g+ vg+kktLvfy+grap+gekt+Wvmheyrl
OPUNC09G08600.1 116 TGKDKAVLHHggggggGGRPVGVKKTLVFYRGRAPRGEKTSWVMHEYRL 164
*********98888877788***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MAGGGGGGSD RASSSTAMIS RLLPPGFRFR PTDGELVAHY LARKAADAGF TCTAIRDVDL 60 YRAEPWDLLP PPREAAADGA EEEEERCGYF FCTRSFRWPS GTRTNRATAA GYWKSTGKDK 120 AVLHHGGGGG GGGRPVGVKK TLVFYRGRAP RGEKTSWVMH EYRLLHGGGG AAATASSSPT 180 TTLAGVAHSE WVICRVFVRK TPNGNNDRGT EHHLPSDNTH LRSSPAPANS FDGAGHASCS 240 FFSSANESMA PSDHFNIGDD MILHGHEEEL LMTNCSSAFY LPELLDYESF LLDL
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed post-transcriptionally by miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808, ECO:0000269|PubMed:18305205, ECO:0000305|PubMed:15723790}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012617 | 1e-133 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Vidal EA,Álvarez JM,Gutiérrez RA
Nitrate regulation of AFB3 and NAC4 gene expression in Arabidopsis roots depends on NRT1.1 nitrate transport function. Plant Signal Behav, 2014. 9(3): p. e28501 [PMID:24642706] - Lee MH,Jeon HS,Kim HG,Park OK
An Arabidopsis NAC transcription factor NAC4 promotes pathogen-induced cell death under negative regulation by microRNA164. New Phytol., 2017. 214(1): p. 343-360 [PMID:28032643]
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