 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OPUNC09G07160.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 329aa MW: 35082 Da PI: 4.943 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC09G07160.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.8 | 4.4e-19 | 84 | 137 | 4 | 56 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++t+eq+++Le+ Fe+ +r++ e++ eLA++lg+ rqV vWFqNrRa++k
OPUNC09G07160.1 84 KRRLTAEQVRALERSFEEeKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWK 137
4579*************98**********************************9 PP
|
| 2 | HD-ZIP_I/II | 121.9 | 3.1e-39 | 83 | 173 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+krrl++eqv++LE+sFeee+ kLeperK+elar+Lg+ prqvavWFqnrRAR+ktkqlE d+++L++a+d+l + +++L +++e+Lr+++
OPUNC09G07160.1 83 RKRRLTAEQVRALERSFEEEKrKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRAALAADNESLRSQV 173
8*****************9999******************************************************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MCSMNSGRLV FSSAGAGGGQ MLLFGGHGGF VGGSPVVEDG GRWRRKRPFL TTHEELELQM 60
EDLVDELYGL DETGSTAAAA AARKRRLTAE QVRALERSFE EEKRKLEPER KSELARRLGI 120
APRQVAVWFQ NRRARWKTKQ LELDFDRLRA AHDELLAGRA ALAADNESLR SQVILLTKKL 180
QANGKSPSPS PPAEQTAVPA TVHATTVTAA ESAMLFQLEE GRRCYDAAGC TTTTTTNGGV 240
GVAMPPAPAT RVAAAAAARA DNDSPESYFA GARSPPSSSE DDCGGGGGSD DDPSSSVLLP 300
DAALAGDSFE HAVAADEEAP LNSWEWLWT
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 131 | 139 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CT837895 | 1e-160 | CT837895.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA112M06, full insert sequence. |
