|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
OPUNC09G06680.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
Family |
ERF |
Protein Properties |
Length: 287aa MW: 30480.9 Da PI: 6.671 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC09G06680.1 | genome | OGE | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66 | 7.4e-21 | 104 | 153 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+g
OPUNC09G06680.1 104 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 153
59******9.**********955...5*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MAAAIDLSGE ELMRALEPFI RDASGSPPVC SQFSPTSPFS FPHAAAFAYG GGPAQPEFSP 60 AQIHYIQARL HLQRQAAQSS PLGPRAQPMK ASAAAATPPR PQKLYRGVRQ RHWGKWVAEI 120 RLPRNRTRLW LGTFDTAEEA ALAYDQAAYR LRGDAARLNF PDNAASRGPL HASVDAKLQT 180 LCQNIAAAKN AKKSTATASA SATATSSAPT SNCSSPSSDD ASSCLESADS SPSLSPSSAA 240 TTAETPATVP EMQQLDFSEA PWDEVAAFAL TKYPSYEIDW DSLLAAN
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | CP012617 | 0.0 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |