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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC09G03540.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 249aa MW: 27399.3 Da PI: 4.7193 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC09G03540.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62 | 1.3e-19 | 105 | 154 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +grW++eIrdp+ + +r++lg+++ta eAa+a++a +++++g+
OPUNC09G03540.1 105 YRGVRQRP-WGRWASEIRDPV----KgARVWLGTYDTAVEAARAYDAEARRIHGA 154
9*******.**********75....44*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MCGGAVTPNN YDKPPAPAAW RRRSGQPPSE WGAATKKNKK KKRCGGGGDD DWEAAFREFV 60 AGDDDDEEVG VDMFPSGAGT MERATTEVAV VERPRRRRVR RSYPYRGVRQ RPWGRWASEI 120 RDPVKGARVW LGTYDTAVEA ARAYDAEARR IHGAKARTNF PPDEPPPPPA LCFLLDDDVA 180 ARGNIQESSA PDSVVSASTT SSTVSWEVSD ELILLECCSD DVMDSLLAGF DLNREELTEE 240 GHETSNLVN
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 20 | 42 | RRRSGQPPSEWGAATKKNKKKKR |
2 | 92 | 99 | RPRRRRVR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ453964 | 1e-173 | DQ453964.1 Oryza sativa (indica cultivar-group) clone BAC 101O9 chromosome 9 map Sub1 locus, complete sequence. |