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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
OPUNC09G03530.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 235aa MW: 26590.2 Da PI: 8.0909 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
OPUNC09G03530.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.7 | 2.6e-17 | 114 | 162 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +grW++eIrdp+ + r++lg+f+tae+Aa+a++ ++++g
OPUNC09G03530.1 114 YRGIRQRP-WGRWASEIRDPV----KgIRVWLGTFDTAEGAARAYDDEVRRIYG 162
9*******.**********75....44*******************87777665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MRRRVSSSSS SSSSSPTRDH KTRRSRRKLV VDEDWEAAFR EFLSRDDDDD DGGHHVVVAP 60 LIRSNKCVHG HEVVTSTVGG GAPSSRSRRR SDDDDDDGEQ RRRRRRRERR SYPYRGIRQR 120 PWGRWASEIR DPVKGIRVWL GTFDTAEGAA RAYDDEVRRI YGSNAKTNFP PPTPPPEQPA 180 APVAAERSPS TTPPMTTEDS GDSRILIECC SDDLMDSLLS AFDMTTGDID MRIWS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 87 | 106 | RRRSDDDDDDGEQRRRRRRR |
2 | 99 | 105 | QRRRRRR |
3 | 100 | 106 | RRRRRRR |
4 | 100 | 107 | RRRRRRRE |
5 | 101 | 108 | RRRRRRER |
6 | 101 | 109 | RRRRRRERR |
7 | 102 | 109 | RRRRRERR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FR720463 | 0.0 | FR720463.1 Oryza eichingeri partial sub1C-1 like gene 1, bio material IRGC 101429. |