 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
OPUNC08G19200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 282aa MW: 30521.9 Da PI: 8.0683 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OPUNC08G19200.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 28.9 | 2.1e-09 | 101 | 148 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR+ri +++ L++l+P + +k Ka +L + ++Y++sLq
OPUNC08G19200.1 101 SHSLAERVRRERISQRMKVLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 148
8*************************9....677*****************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MKDAANAKKR KAAAAGGGKG KGKEAPVGEE KESDGKRSKT GDGERKESSV KPKAEQAGSD 60
SSVEDGGGGG QKQGKGKNAK PVEPPKDYVH VRARRGQATD SHSLAERVRR ERISQRMKVL 120
QDLVPGCNKV IGKALMLDEI INYVQSLQRQ VEFLSMKLAT VNPLDFSNLP TLLQKDMFQA 180
CGPSASSVFS LESSNSAFPF AEQGDVFQQF AQNSMESQCT LNQLDLALSQ ATNAAQYAFQ 240
DGTAGANLQQ RNFWEDDLQS VFHIENGQSQ ENGVSAPNFH GW
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK072041 | 0.0 | AK072041.1 Oryza sativa Japonica Group cDNA clone:J013105J01, full insert sequence. |
| GenBank | AK099291 | 0.0 | AK099291.1 Oryza sativa Japonica Group cDNA clone:J023127C06, full insert sequence. |
| GenBank | HQ858869 | 0.0 | HQ858869.1 Oryza sativa Japonica Group isolate UT1678 bHLH transcription factor mRNA, partial cds. |
